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  • #179

Closed
Open
Created Jul 05, 2022 by Oliver Kirsebom@kirsebomOwner

Tensorflow protobuf package version issue

Upon install of ketos and all dependencies in a fresh python environment, I get the following error

>>> import tensorflow
2022-07-05 15:13:16.039574: W tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'libcudart.so.11.0'; dlerror: libcudart.so.11.0: cannot open shared object file: No such file or directory
2022-07-05 15:13:16.039611: I tensorflow/stream_executor/cuda/cudart_stub.cc:29] Ignore above cudart dlerror if you do not have a GPU set up on your machine.
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/home/oliskir/envs/env-ketos-py39/lib/python3.9/site-packages/tensorflow/__init__.py", line 37, in <module>
    from tensorflow.python.tools import module_util as _module_util
  File "/home/oliskir/envs/env-ketos-py39/lib/python3.9/site-packages/tensorflow/python/__init__.py", line 37, in <module>
    from tensorflow.python.eager import context
  File "/home/oliskir/envs/env-ketos-py39/lib/python3.9/site-packages/tensorflow/python/eager/context.py", line 29, in <module>
    from tensorflow.core.framework import function_pb2
  File "/home/oliskir/envs/env-ketos-py39/lib/python3.9/site-packages/tensorflow/core/framework/function_pb2.py", line 16, in <module>
    from tensorflow.core.framework import attr_value_pb2 as tensorflow_dot_core_dot_framework_dot_attr__value__pb2
  File "/home/oliskir/envs/env-ketos-py39/lib/python3.9/site-packages/tensorflow/core/framework/attr_value_pb2.py", line 16, in <module>
    from tensorflow.core.framework import tensor_pb2 as tensorflow_dot_core_dot_framework_dot_tensor__pb2
  File "/home/oliskir/envs/env-ketos-py39/lib/python3.9/site-packages/tensorflow/core/framework/tensor_pb2.py", line 16, in <module>
    from tensorflow.core.framework import resource_handle_pb2 as tensorflow_dot_core_dot_framework_dot_resource__handle__pb2
  File "/home/oliskir/envs/env-ketos-py39/lib/python3.9/site-packages/tensorflow/core/framework/resource_handle_pb2.py", line 16, in <module>
    from tensorflow.core.framework import tensor_shape_pb2 as tensorflow_dot_core_dot_framework_dot_tensor__shape__pb2
  File "/home/oliskir/envs/env-ketos-py39/lib/python3.9/site-packages/tensorflow/core/framework/tensor_shape_pb2.py", line 36, in <module>
    _descriptor.FieldDescriptor(
  File "/home/oliskir/envs/env-ketos-py39/lib/python3.9/site-packages/google/protobuf/descriptor.py", line 560, in __new__
    _message.Message._CheckCalledFromGeneratedFile()
TypeError: Descriptors cannot not be created directly.
If this call came from a _pb2.py file, your generated code is out of date and must be regenerated with protoc >= 3.19.0.
If you cannot immediately regenerate your protos, some other possible workarounds are:
 1. Downgrade the protobuf package to 3.20.x or lower.
 2. Set PROTOCOL_BUFFERS_PYTHON_IMPLEMENTATION=python (but this will use pure-Python parsing and will be much slower).

More information: https://developers.google.com/protocol-buffers/docs/news/2022-05-06#python-updates

Some contextual information:

  • Ubuntu 22.04
  • Python 3.9.13
  • Ketos 2.6.1
  • Tensorflow 2.8.0
  • Pip 22.1.2

Installation method:

python setup sdist
pip install dist/ketos-2.6.1.tar.gz

The solution is very simple:

pip install protobuf==3.20.*

Not sure if this requires any updates to the docs?

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